Research Output 1953 2019

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Review article
2019

A systematic review and content analysis of classroom teacher professional development in nutrition education programs

Dunn, C. G., Burgermaster, M., Adams, A., Koch, P., Adintori, P. A. & Stage, V. C., Jan 1 2019, In : Advances in Nutrition. 10, 2, p. 351-359 9 p.

Research output: Contribution to journalReview article

professional development
nutrition education
systematic review
education programs
teachers

Circadian Neurobiology and the Physiologic Regulation of Sleep and Wakefulness

Schwartz, W. & Klerman, E. B., Aug 1 2019, In : Neurologic Clinics. 37, 3, p. 475-486 12 p.

Research output: Contribution to journalReview article

Neurobiology
Wakefulness
Sleep
Periodicity
Appointments and Schedules
2 Citations (Scopus)

Highly resolved brownian motion in space and in time

Mo, J. & Raizen, M., Jan 5 2019, In : Annual Review of Fluid Mechanics. 51, p. 403-428 26 p.

Research output: Contribution to journalReview article

equipartition theorem
fluids
trapped particles
viscoelasticity
wettability
6 Citations (Scopus)

Neuroimmune signaling in alcohol use disorder

Erickson, E. K., Grantham, E. K., Warden, A. S. & Harris, R. A., Feb 1 2019, In : Pharmacology Biochemistry and Behavior. 177, p. 34-60 27 p.

Research output: Contribution to journalReview article

Alcohols
Neuroimmunomodulation
Brain
Drug therapy
Major Depressive Disorder
1 Citation (Scopus)

Pattern Generation with Nucleic Acid Chemical Reaction Networks

Wang, S. S. & Ellington, A., Jan 1 2019, In : Chemical Reviews.

Research output: Contribution to journalReview article

Nucleic Acids
Chemical reactions
DNA
Networks (circuits)
Arsenals

Reprogramming the brain with synthetic neurobiology

Gardner, E. & Ellington, A., Aug 1 2019, In : Current Opinion in Biotechnology. 58, p. 37-44 8 p.

Research output: Contribution to journalReview article

Neurobiology
Neurosciences
Brain
Connectome
Genetic Techniques
1 Citation (Scopus)

Substrate selection by the proteasome through initiation regions

Tomita, T. & Matouschek, A. T., Jul 1 2019, In : Protein Science. 28, 7, p. 1222-1232 11 p.

Research output: Contribution to journalReview article

Proteasome Endopeptidase Complex
Substrates
Degradation
Proteolysis
Ubiquitinated Proteins

Synthetic evolution

Simon, A. J., d’Oelsnitz, S. & Ellington, A., Jan 1 2019, In : Nature Biotechnology.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Genes
Mutation
Genetic Selection
Biotechnology
1 Citation (Scopus)

The Role of tRNA in Establishing New Genetic Codes

Thyer, R. & Ellington, A., Mar 19 2019, In : Biochemistry. 58, 11, p. 1460-1463 4 p.

Research output: Contribution to journalReview article

Genetic Code
Transfer RNA
Amino Acyl-tRNA Synthetases
Ligases
Amino Acid-Specific Transfer RNA
2018
16 Citations (Scopus)

Biological/Genetic Regulation of Physical Activity Level: Consensus from GenBioPAC

Lightfoot, J. T., De Geus, E. J. C., Booth, F. W., Bray, M., Den Hoed, M., Kaprio, J., Kelly, S. A., Pomp, D., Saul, M. C., Thomis, M. A., Garland, T. & Bouchard, C., Apr 1 2018, In : Medicine and science in sports and exercise. 50, 4, p. 863-873 11 p.

Research output: Contribution to journalReview article

Public Sector
Biological Factors
Public Policy
Animal Models
Health
3 Citations (Scopus)

Coming to Consensus: A Unifying Model Emerges for Convergent Extension

Huebner, R. J. & Wallingford, J. B., Aug 20 2018, In : Developmental Cell. 46, 4, p. 389-396 8 p.

Research output: Contribution to journalReview article

Intercalation
Cell Movement
Flavors
Mechanics
6 Citations (Scopus)

Continuous directed evolution for strain and protein engineering

d'Oelsnitz, S. & Ellington, A., Oct 1 2018, In : Current Opinion in Biotechnology. 53, p. 158-163 6 p.

Research output: Contribution to journalReview article

Protein Engineering
Mutagenesis
Synthetic Biology
Proteins
Automation
3 Citations (Scopus)

From gene networks to drugs: systems pharmacology approaches for AUD

Ferguson, L. B., Harris, R. A. & Mayfield, R. D., Jun 1 2018, In : Psychopharmacology. 235, 6, p. 1635-1662 28 p.

Research output: Contribution to journalReview article

Gene Regulatory Networks
Chromosome Mapping
Alcohols
Pharmacology
Drug Interactions
2 Citations (Scopus)

Racial disparities in bipolar disorder treatment and research: a call to action

Akinhanmi, M. O., Biernacka, J. M., Strakowski, S., McElroy, S. L., Balls Berry, J. E., Merikangas, K. R., Assari, S., McInnis, M. G., Schulze, T. G., LeBoyer, M., Tamminga, C., Patten, C. & Frye, M. A., Sep 1 2018, In : Bipolar Disorders. 20, 6, p. 506-514 9 p.

Research output: Contribution to journalReview article

Bipolar Disorder
Racism
Diagnostic Errors
Research
International Classification of Diseases
14 Citations (Scopus)

Review: Synovial Cell Metabolism and Chronic Inflammation in Rheumatoid Arthritis

Falconer, J., Murphy, A. N., Young, S. P., Clark, A. R., Tiziani, S., Guma, M. & Buckley, C. D., Jul 1 2018, In : Arthritis and Rheumatology. 70, 7, p. 984-999 16 p.

Research output: Contribution to journalReview article

Rheumatoid Arthritis
Inflammation
Synovial Membrane
Fibroblasts
Macrophages
13 Citations (Scopus)

The Evolving Understanding of Dopamine Neurons in the Substantia Nigra and Ventral Tegmental Area

Gantz, S. C., Ford, C. P., Morikawa, H. & Williams, J. T., Feb 10 2018, In : Annual Review of Physiology. 80, p. 219-241 23 p.

Research output: Contribution to journalReview article

Ventral Tegmental Area
Dopaminergic Neurons
Substantia Nigra
Population
Neurochemistry
2 Citations (Scopus)

The use of social media in nutrition interventions for adolescents and young adults—A systematic review

Chau, M. M., Burgermaster, M. & Mamykina, L., Dec 1 2018, In : International Journal of Medical Informatics. 120, p. 77-91 15 p.

Research output: Contribution to journalReview article

Social Media
Young Adult
Digital Libraries
Education
PubMed
2017
7 Citations (Scopus)

Best practices for gauging evidence of causality in air pollution epidemiology

Dominici, F. & Zigler, C., Dec 15 2017, In : American journal of epidemiology. 186, 12, p. 1303-1309 7 p.

Research output: Contribution to journalReview article

Air Pollution
Practice Guidelines
Causality
Epidemiology
Research Personnel
20 Citations (Scopus)

DNA modifications in models of alcohol use disorders

Tulisiak, C. T., Harris, R. A. & Ponomarev, I., May 1 2017, In : Alcohol. 60, p. 19-30 12 p.

Research output: Contribution to journalReview article

alcohol
Alcohols
Methylation
DNA
Epigenomics
6 Citations (Scopus)

DUSP11–An RNA phosphatase that regulates host and viral non-coding RNAs in mammalian cells

Burke, J. M. & Sullivan, C. S., Nov 2 2017, In : RNA biology. 14, 11, p. 1457-1465 9 p.

Research output: Contribution to journalReview article

Dual-Specificity Phosphatases
Untranslated RNA
Viral RNA
Phosphoric Monoester Hydrolases
RNA
3 Citations (Scopus)

Eukaryotic resectosomes: A single-molecule perspective

Myler, L. R. & Finkelstein, I. J., Aug 1 2017, In : Progress in Biophysics and Molecular Biology. 127, p. 119-129 11 p.

Research output: Contribution to journalReview article

Homologous Recombination
Proteins
Chromatids
Double-Stranded DNA Breaks
DNA
14 Citations (Scopus)

From Planar Cell Polarity to Ciliogenesis and Back: The Curious Tale of the PPE and CPLANE proteins

Adler, P. N. & Wallingford, J. B., May 1 2017, In : Trends in cell biology. 27, 5, p. 379-390 12 p.

Research output: Contribution to journalReview article

Cell Polarity
Genes
Proteins
Medical Genetics
Animal Models
64 Citations (Scopus)

Planar cell polarity in development and disease

Butler, M. T. & Wallingford, J. B., Jun 1 2017, In : Nature Reviews Molecular Cell Biology. 18, 6, p. 375-388 14 p.

Research output: Contribution to journalReview article

Body Patterning
Cell Polarity
Cues
Cellular Structures
Endocytosis
133 Citations (Scopus)

Progress in and promise of bacterial quorum sensing research

Whiteley, M., Diggle, S. P. & Greenberg, E. P., Nov 15 2017, In : NATURE. 551, 7680, p. 313-320 8 p.

Research output: Contribution to journalReview article

Quorum Sensing
Research
Bacteria
Genomics
Biochemistry
33 Citations (Scopus)

Recognition of Client Proteins by the Proteasome

Yu, H. & Matouschek, A. T., May 22 2017, In : Annual Review of Biophysics. 46, p. 149-173 25 p.

Research output: Contribution to journalReview article

Proteasome Endopeptidase Complex
Ubiquitin
Proteins
Degradation
Substrates
1 Citation (Scopus)

Sociocultural Considerations in Juvenile Arthritis: A Review

Lewis, K. A., Brown, S. A., Tiziani, S. & Carrasco, R., Nov 1 2017, In : Journal of pediatric nursing. 37, p. 13-21 9 p.

Research output: Contribution to journalReview article

Juvenile Arthritis
Health
Research
Social Class
Quality of Life
13 Citations (Scopus)

Systems-wide Studies Uncover Commander, a Multiprotein Complex Essential to Human Development

Mallam, A. L. & Marcotte, E. M., May 24 2017, In : Cell Systems. 4, 5, p. 483-494 12 p.

Research output: Contribution to journalReview article

Open Access
Multiprotein Complexes
Human Development
Notch Receptors
Lipoprotein Receptors
Systems Biology
12 Citations (Scopus)

The Corticotropin Releasing Factor Receptor 1 in Alcohol Use Disorder: Still a Valid Drug Target?

Pomrenze, M. B., Fetterly, T. L., Winder, D. G. & Messing, R. O., Dec 1 2017, In : Alcoholism: Clinical and Experimental Research. 41, 12, p. 1986-1999 14 p.

Research output: Contribution to journalReview article

Alcohols
Corticotropin-Releasing Hormone
Alcohol Drinking
Pharmaceutical Preparations
Physiological Stress
16 Citations (Scopus)

Two sides of a coin: Ecological and chronobiological perspectives of timing in the wild

Helm, B., Visser, M. E., Schwartz, W., Kronfeld-Schor, N., Gerkema, M., Piersma, T. & Bloch, G., Nov 19 2017, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 372, 1734, 20160246.

Research output: Contribution to journalReview article

Numismatics
Clocks
organisms
Ecology
Terminology
2016
5 Citations (Scopus)

An in vitro selection for small molecule induced switching RNA molecules

Martini, L., Ellington, A. & Mansy, S. S., Aug 15 2016, In : Methods. 106, p. 51-57 7 p.

Research output: Contribution to journalReview article

Riboswitch
RNA
Molecules
Nucleotide Aptamers
Thiamine Pyrophosphate
8 Citations (Scopus)

Causal Inference Methods for Estimating Long-Term Health Effects of Air Quality Regulations

HEI Health Review Committee, May 1 2016, In : Research report (Health Effects Institute). 187, p. 5-49 45 p.

Research output: Contribution to journalReview article

Social Responsibility
Air
Health
Power Plants
Medicare
77 Citations (Scopus)

Causes of evolutionary rate variation among protein sites

Echave, J., Spielman, S. J. & Wilke, C. O., Feb 1 2016, In : Nature Reviews Genetics. 17, 2, p. 109-121 13 p.

Research output: Contribution to journalReview article

Sequence Alignment
Mutation Rate
Catalytic Domain
Proteins
Enzymes
17 Citations (Scopus)

Complex Homology and the Evolution of Nervous Systems

Liebeskind, B. J., Hillis, D. M., Zakon, H. H. & Hofmann, J., Jan 1 2016, In : Trends in Ecology and Evolution. 31, 2, p. 127-135 9 p.

Research output: Contribution to journalReview article

nervous system
homology
animal
animals
central nervous system
21 Citations (Scopus)

Immunoglobulin isotype knowledge and application to Fc engineering

Brezski, R. J. & Georgiou, G., Jun 1 2016, In : Current Opinion in Immunology. 40, p. 62-69 8 p.

Research output: Contribution to journalReview article

Immunoglobulin Isotypes
Antibodies
Immunoglobulin G
Phagocytosis
Therapeutics
64 Citations (Scopus)

Ion Activation Methods for Peptides and Proteins

Brodbelt, J. S., Jan 5 2016, In : Analytical Chemistry. 88, 1, p. 30-51 22 p.

Research output: Contribution to journalReview article

Tandem Mass Spectrometry
Proteomics
Ions
Peptides
Proteins
16 Citations (Scopus)

Iron Hydride Detection and Intramolecular Hydride Transfer in a Synthetic Model of Mono-Iron Hydrogenase with a CNS Chelate

Durgaprasad, G., Xie, Z. L. & Rose, M., Jan 19 2016, In : Inorganic Chemistry. 55, 2, p. 386-389 4 p.

Research output: Contribution to journalReview article

Carbon Monoxide
chelates
Hydrides
hydrides
Iron
42 Citations (Scopus)

Metabolomics in rheumatic diseases: Desperately seeking biomarkers

Guma, M., Tiziani, S. & Firestein, G. S., May 1 2016, In : Nature Reviews Rheumatology. 12, 5, p. 269-281 13 p.

Research output: Contribution to journalReview article

Metabolomics
Rheumatic Diseases
Biomarkers
Cell Physiological Phenomena
Immune System Diseases
46 Citations (Scopus)

NIH working group report - Using genomic information to guide weight management: From universal to precision treatment

Bray, M., Loos, R. J. F., McCaffery, J. M., Ling, C., Franks, P. W., Weinstock, G. M., Snyder, M. P., Vassy, J. L. & Agurs-Collins, T., Jan 1 2016, In : Obesity. 24, 1, p. 14-22 9 p.

Research output: Contribution to journalReview article

Weight Loss
Weights and Measures
Obesity
Genetic Research
Precision Medicine
1 Citation (Scopus)

Physical Organic Chemistry by Any Other Name Would Smell as Sweet

Chapin, B. M. & Anslyn, E. V., Jan 1 2016, In : Israel Journal of Chemistry. 56, 1, p. 38-45 8 p.

Research output: Contribution to journalReview article

Supramolecular chemistry
Organometallics
Terminology
Organic Chemistry
Molecules
5 Citations (Scopus)

Recent advances in synthetic biosafety [version 1; referees: 2 approved]

Simon, A. J. & Ellington, A., Jan 1 2016, In : F1000Research. 5, 2118.

Research output: Contribution to journalReview article

Open Access
Industrial chemicals
Environmental Pollutants
Industrial applications
Genes
Tissue
118 Citations (Scopus)

Rhythms of the hippocampal network

Colgin, L. L., Apr 1 2016, In : Nature Reviews Neuroscience. 17, 4, p. 239-249 11 p.

Research output: Contribution to journalReview article

Theta Rhythm
Rodentia
Gamma Rhythm
25 Citations (Scopus)

Synthesis of Ynones and Recent Application in Transition-Metal-Catalyzed Reactions

Whittaker, R. E., Dermenci, A. & Dong, G., Jan 18 2016, In : Synthesis (Germany). 48, 2, p. 161-183 23 p.

Research output: Contribution to journalReview article

Ketones
Transition metals
Molecules
Cyclization
Metals
74 Citations (Scopus)

The biogeography of polymicrobial infection

Stacy, A., McNally, L., Darch, S. E., Brown, S. P. & Whiteley, M., Feb 1 2016, In : Nature Reviews Microbiology. 14, 2, p. 93-105 13 p.

Research output: Contribution to journalReview article

Coinfection
Human Body
Virulence
Infection
Therapeutics
30 Citations (Scopus)

The curious ability of polyethylene glycol fusion technologies to restore lost behaviors after nerve severance

Bittner, G. D., Sengelaub, D. R., Trevino, R. C., Peduzzi, J. D., Mikesh, M., Ghergherehchi, C. L., Schallert, T. J. & Thayer, W. P., Mar 1 2016, In : Journal of Neuroscience Research. 94, 3, p. 207-230 24 p.

Research output: Contribution to journalReview article

Axons
Technology
Peripheral Nerves
Wallerian Degeneration
Regeneration
9 Citations (Scopus)

The Determinants of Directionality in Transcriptional Initiation

Bagchi, D. N. & Iyer, V. R., Jun 1 2016, In : Trends in Genetics. 32, 6, p. 322-333 12 p.

Research output: Contribution to journalReview article

RNA Polymerase II
Genes
Genome
RNA
DNA
14 Citations (Scopus)

The neuroimmune transcriptome and alcohol dependence: Potential for targeted therapies

Warden, A., Erickson, E., Robinson, G., Harris, R. A. & Mayfield, R. D., Dec 1 2016, In : Pharmacogenomics. 17, 18, p. 2081-2096 16 p.

Research output: Contribution to journalReview article

Transcriptome
Alcoholism
Brain
Therapeutics
Gene Regulatory Networks
16 Citations (Scopus)

Virus–Host Interactions and the ARTD/PARP Family of Enzymes

Kuny, C. V. & Sullivan, C. S., Mar 1 2016, In : PLoS pathogens. 12, 3, e1005453.

Research output: Contribution to journalReview article

Open Access
Virus Physiological Phenomena
Host-Pathogen Interactions
Poly(ADP-ribose) Polymerases
Viruses
Enzymes

'What has supramolecular chemistry done for us?': A personal perspective and opinions on our field

Anslyn, E. V., Jun 2 2016, In : Supramolecular Chemistry. 28, 5-6, p. 339-340 2 p.

Research output: Contribution to journalReview article

Supramolecular chemistry
2015
3 Citations (Scopus)

Adaptive workarounds

Eastwick, P. & Durante, K. M., Feb 1 2015, In : Current Opinion in Psychology. 1, p. 92-96 5 p.

Research output: Contribution to journalReview article

Pair Bond
Aptitude
Phylogeny
Testosterone
8 Citations (Scopus)

Annual review of Asian American psychology, 2014

Kim, S. Y., Shen, Y., Hou, Y., Tilton, K. E., Juang, L. & Wang, Y., Jan 1 2015, In : Asian American Journal of Psychology. 6, 4, p. 291-332 42 p.

Research output: Contribution to journalReview article

Asian Americans
Psychology
Health Services Needs and Demand
Ethnic Groups
Health